PUBLICATIONS
Intercellular Arc signaling regulates vasodilation
de la Peña JB, Barragan-Iglesias P, Lou TF, Kunder N, Loerch S, Shukla T, Basavarajappa L, Song J, James DN, Megat S, Moy JK, Wanghzou A, Ray PR, Hoyt K, Steward O, Price TJ, Shepherd JD, Campbell ZT (2021). Journal of Neuroscience, 41(37):7712-7726.
The immediate early gene Arc is not required for hippocampal long-term potentiation
Kyrke-Smith M, Volk LJ, Cooke SF, Bear MF, Huganir RL, Shepherd JD (2021). Journal of Neuroscience, 41(19):4202-4211.
Computational cannula microscopy of neurons using neural networks
Guo R, Pan Z, Taibi A, Shepherd JD, Menon R (2020). Optics Letters, 45:2111-2114.
Three-dimensional genome restructuring across timescales of activity-induced neuronal gene expression
Beagan JA, Pastuzyn ED, Fernandez LR, Guo MH, Feng K, Titus KR, Chandrashekar H, Shepherd JD, Phillips-Cremins JE (2020). Nature Neuroscience, 23:707-717.
Expanding the AtLAS of non-coding RNA functions in the brain
Regier MJ, Shepherd JD (2020). Cell Research, 30:283-284.
Experience-dependent development and maintenance of binocular neurons in the mouse visual cortex
Jenks K, Shepherd JD (2020). Cell Reports, 30(6):1982-1994.e4.
Structures of virus-like capsids formed by the Drosophila neuronal Arc proteins
Erlendsson S, Morado DR, Cullen HB, Feschotte C, Shepherd JD, Briggs, JAG (2020). Nature Neuroscience, 23:172–175.
Intercellular communication in the nervous system goes viral
Hantak MP, Einstein J, Kearns RB, Shepherd JD (2020). Trends in Neurosciences, 44(4): 248–259.
The microbiota protects from viralinduced neurologic damage through microglia-intrinsic TLR signaling
Brown DG, Soto R, Yandamuri S, Stone C, Dickey L, Gomes-Neto JC, Pastuzyn ED, Bell R, Petersen C, Buhrke K, Fujinami RS, O’Connell RM, Stephens WZ, Shepherd JD, Lane TE and Round JL (2019). eLife, 8:e47117
Interneuron simplification and loss of structural plasticity as markers of aging-related functional decline
Eavri R, Shepherd JD, Welsh C, Flanders G, Bear M, Nedivi E (2018). Journal of Neuroscience, 38:8421-8432.
The temporal dynamics of Arc expression regulate cognitive flexibility
Wall M, Collins D, Chery S, Allen Z, Pastuzyn ED, George A, Nikolova V, Moy S, Philpot B, Shepherd JD, Müller J, Ehlers M, Mabb A, Corrêa S (2018). Neuron, 6:124-1132.e7.
Arc - an endogenous neuronal retrovirus?
Shepherd JD (2018). Seminars in Cell & Developmental Biology, 77:73-78.
The neuronal gene Arc encodes a repurposed retrotransposon gag protein that mediates intercellular RNA transfer
Pastuzyn ED, Day CE, Kearns RB, Kyrke-Smith M, Taibi AV, McCormick J, Yoder N, Belnap DM, Erlendsson S, Morado DR, Briggs JAG, Feschotte C, Shepherd JD (2018). Cell, 172:1-2.
Activity-dependent Arc expression and homeostatic synaptic plasticity are altered in neurons from a mouse model of Angelman syndrome
Pastuzyn ED, Shepherd JD (2017). Frontiers in Molecular Neuroscience, 10:234.
Arc restores juvenile plasticity in adult mouse visual cortex
Jenks KR, Kim T, Pastuzyn ED, Okuno H, Taibi AV, Bito H, Bear MF, Shepherd JD (2017). Proc Natl Acad Sci, 114(34):9182-9187.
Deep-brain imaging via epi-fluorescence computational cannula microscopy
Kim G, Nagarajan N, Pastuzyn E, Jenks KR, Capecchi M, Shepherd JD, Menon R (2017). Scientific Reports, 7, 44791.
Arc: building a bridge from viruses to memory
Day C, Shepherd JD (2015). Biochemical Journal, 469(1):e1-3.
Imaging activity in neurons and glia with a Polr2a-based and cre-dependent GCaMP5G-IRES-tdTomato reporter mouse
Gee JM, Smith NA, Fernandez FR, Economo MN, Brunert D, Rothermel M, Morris SC, Talbot A, Palumbos S, Ichida JM, Shepherd JD, West PJ, Wachowiak M, Capecchi MR, Wilcox KS, White JA, Tvrdik P (2014). Neuron, 83(5):1058-72.
The role of ionotropic glutamate receptors in childhood neurodevelopmental disorders: autism spectrum disorders and fragile X syndrome
Uzunova G, Hollander E, Shepherd JD (2014). Current Neuropharmacology, 12(1):71-98.